Journal of X-Ray Science and Technology - Volume 25, issue 3

Authors: Jaccard, Nicolas | Rogers, Thomas W. | Morton, Edward J. | Griffin, Lewis D.

Article Type: Research Article

Abstract: BACKGROUND: Non-intrusive inspection systems based on X-ray radiography techniques are routinely used at transport hubs to ensure the conformity of cargo content with the supplied shipping manifest. As trade volumes increase and regulations become more stringent, manual inspection by trained operators is less and less viable due to low throughput. Machine vision techniques can assist operators in their task by automating parts of the inspection workflow. Since cars are routinely involved in trafficking, export fraud, and tax evasion schemes, they represent an attractive target for automated detection and flagging for subsequent inspection by operators. OBJECTIVE: Development and …evaluation of a novel method for the automated detection of cars in complex X-ray cargo imagery. METHODS: X-ray cargo images from a stream-of-commerce dataset were classified using a window-based scheme. The limited number of car images was addressed by using an oversampling scheme. Different Convolutional Neural Network (CNN) architectures were compared with well-established bag of words approaches. In addition, robustness to concealment was evaluated by projection of objects into car images. RESULTS: CNN approaches outperformed all other methods evaluated, achieving 100% car image classification rate for a false positive rate of 1-in-454. Cars that were partially or completely obscured by other goods, a modus operandi frequently adopted by criminals, were correctly detected. CONCLUSIONS: We believe that this level of performance suggests that the method is suitable for deployment in the field. It is expected that the generic object detection workflow described can be extended to other object classes given the availability of suitable training data. Show more

Keywords: Security, Deep Learning, X-ray cargo image, Classification

DOI: 10.3233/XST-16199

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 323-339, 2017

Authors: Baikejiang, Reheman | Zhang, Wei | Li, Changqing

Article Type: Research Article

Abstract: Diffuse optical tomography (DOT) has attracted attentions in the last two decades due to its intrinsic sensitivity in imaging chromophores of tissues such as hemoglobin, water, and lipid. However, DOT has not been clinically accepted yet due to its low spatial resolution caused by strong optical scattering in tissues. Structural guidance provided by an anatomical imaging modality enhances the DOT imaging substantially. Here, we propose a computed tomography (CT) guided multispectral DOT imaging system for breast cancer imaging. To validate its feasibility, we have built a prototype DOT imaging system which consists of a laser at the wavelength of 650 nm …and an electron multiplying charge coupled device (EMCCD) camera. We have validated the CT guided DOT reconstruction algorithms with numerical simulations and phantom experiments, in which different imaging setup parameters, such as projection number of measurements and width of measurement patch, have been investigated. Our results indicate that an air-cooling EMCCD camera is good enough for the transmission mode DOT imaging. We have also found that measurements at six angular projections are sufficient for DOT to reconstruct the optical targets with 2 and 4 times absorption contrast when the CT guidance is applied. Finally, we have described our future research plan on integration of a multispectral DOT imaging system into a breast CT scanner. Show more

Keywords: Diffuse optical tomography, multi-modality imaging, breast cancer imaging

DOI: 10.3233/XST-16183

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 341-355, 2017

Authors: Liu, Jiangkun | Cai, Weixing | Ning, Ruola

Article Type: Research Article

Abstract: Grating-based differential phase contrast (DPC) imaging enables the use of a hospital-grade X-ray tube, but compromises the image quality due to insufficiently coherent illumination. In this research, a bench-top DPC cone beam CT (DPC-CBCT) was systematically evaluated and compared with the traditional attenuation-based CBCT in terms of contrast to noise ratio, noise property, and contrast resolution through phantom studies. In order to evaluate DPC-CBCT for soft tissue imaging, breast specimen and small animal studies were carried out. Phantom studies indicate that phase image has lower-frequency noise, higher CNR, and improved contrast resolution. However, phase image quality was degraded in soft …tissue imaging due to coherence loss caused by small-angle scattering. Hence dark-field imaging was introduced to quantitatively investigate small-angle scattering caused by an object. Experimental results indicate that inhomogeneous objects affect phase contrast imaging, phase image is more sensitive to noise, and its performance is material dependent. Dark-field imaging could also be used to locate and reduce phase image noise and artifact caused by small-angle scattering. Show more

Keywords: Cone beam CT, dark-field imaging, phase contrast imaging

DOI: 10.3233/XST-16184

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 357-372, 2017

Authors: Shah, Jainil P. | Mann, Steve D. | Tornai, Martin P.

Article Type: Research Article

Abstract: OBJECTIVE: The purpose of this study was to utilize a dedicated breast CT system using a 2D beam stop array to physically evaluate the scatter to primary ratios (SPRs) of different geometric phantoms and prospectively acquired clinical patient data. METHODS: Including clinically unrealizable compositions of 100% glandular and 100% fat, projection images were acquired using three geometrically different phantoms filled with fluids simulating breast tissue. The beam stop array method was used for measuring scatter in projection space, and creating the scatter corrected primary images. 2D SPRs were calculated. Additionally, a new figure of merit, the 3D …normalized scatter contribution (NSC) volumes were calculated. RESULTS: The 2D SPR values (0.52–1.10) were primarily dependent on phantom geometry; a secondary dependence was due to their uniform density; 2D SPRs were low frequency and smoothly varying in the uniformly filled phantoms. SPRs of clinical patient data followed similar trends as phantoms, but with noticeable deviations and high frequency components due to the heterogeneous distribution of glandular tissue. The maximum measured patient 2D SPRs were all <0.6, even for the largest diameter breast. These results demonstrate modest scatter components with changing object geometries and densities; the 3D NSC volumes with higher frequency components help visualize scatter distribution throughout the reconstructed image volumes. Furthermore, the SPRs in the heterogeneous clinical breast cases were underestimated by the equivalent density, uniformly filled phantoms. CONCLUSIONS: These results provide guidance on the use of uniformly distributed density and differently shaped phantoms when considering simulations. They also clearly demonstrate that results from patients can vary considerably from 2D SPRs of uniformly simulated phantoms. Show more

Keywords: Mammotomography, breast CT, scatter correction, beam stop array, scatter-to-primary ratio

DOI: 10.3233/XST-16202

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 373-389, 2017

Authors: Ma, Junchao | Yu, Nan | Shen, Cong | Wang, Zhimin | He, Taiping | Guo, You-min

Article Type: Research Article

Abstract: BACKGROUND: This study aims to develop a computerized scheme that utilizes a differential geometric approach to identify pulmonary vessels and then evaluate the performance of the scheme on the CT images of heavy smokers. METHODS: The scheme consists of two primary steps to segment entire lung vascular tree and identify the number of pulmonary vessels in a cross section. The scheme performance including accuracy, consistency, and efficiency was assessed using 102 chest CT scans. Further assessment was performed on the relationship between pulmonary vessels and the extent of emphysema as well as pulmonary artery alteration. RESULTS: …The mean number of vessels in the cross section at the 5th generation was 17.84±4.74 and 17.23±4.85 assessed by computerized scheme and radiologists, respectively, which are significantly different (t  = 2.12, p  = 0.055). The results were consistent with those obtained by using a semi-automatic tool (r  = 0.75, p  = 0.01). In addition, in the 5th generation, the mean number of vessels was inversely related to the percentage of the low attenuation area (r  = –0.704, p  = 0.000), the mean lumen area of pulmonary vessel was inversely related to the mean value of main pulmonary artery diameter (r  = –0.617, p  = 0.000). The computational time of segmenting vessels was 6.50±0.02 seconds, which is much less than the average 8 minutes of the time spent by radiologists using the semi-automatic tool. CONCLUSION: Applying the computerized scheme yields reasonable performance on the segmentation of pulmonary vessels. The alteration of pulmonary vessels may reflect the presence of pulmonary hypertension, as well as the extent of emphysema. Show more

Keywords: Emphysema, computed tomography, pulmonary vessel, smoke, chronic obstructive pulmonary disease

DOI: 10.3233/XST-16216

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 391-402, 2017

Authors: Arai, Tomohiro | Misawa, Masaki | Arai, Miki | Shinozaki, Masafumi | Sakamoto, Kayo | Yajima, Yoshinobu | Nozaki, Yuichi | Tajima, Tsuyoshi | Sato, Masanori | Hinoshita, Fumihiko

Article Type: Research Article

Abstract: BACKGROUND: Currently, no standardized method for measuring intrahepatic fat density via conventional computed tomography (CT) exists. OBJECTIVE: We aim to quantify intrahepatic fat density via material decomposition analysis using rapid kilovolt peak-switching dual-energy (RSDE) CT. METHODS: Homogenized porcine liver and fat (lard) were mixed in various ratios to produce phantoms for fat density verification. The actual fat density was measured on the basis of the phantom volume and weight, and these measurements were used as reference densities. The fat and liver mass attenuation coefficients, which were used as the material basis pairs, were employed in …the material decomposition analysis. Then, the measured fat density of each phantom was compared with the reference densities. RESULTS: For fat content differences exceeding 2%, the measured fat density for the phantoms became statistically significant (p  < 0.01). The correlation between the reference densities and RSDE-measured fat densities was reasonably high (R  > 0.9997); this indicates the validity of this analysis method. CONCLUSIONS: Intrahepatic fat density can be measured using the mass attenuation coefficients of fat and liver in a material decomposition analysis. Given the knowledge of the accuracy and the limitations found in this study, our method can quantitatively evaluate fat density. Show more

Keywords: Computed tomography, dual energy, quality assurance, fatty liver, fat density, material decomposition

DOI: 10.3233/XST-16175

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 403-415, 2017

Authors: Shi, Hongli | Yang, Zhi | Luo, Shuqian

Article Type: Research Article

Abstract: BACKGROUND: The beam hardening artifact is one of most important modalities of metal artifact for polychromatic X-ray computed tomography (CT), which can impair the image quality seriously. OBJECTIVE: An iterative approach is proposed to reduce beam hardening artifact caused by metallic components in polychromatic X-ray CT. METHODS: According to Lambert-Beer law, the (detected) projections can be expressed as monotonic nonlinear functions of element geometry projections, which are the theoretical projections produced only by the pixel intensities (image grayscale) of certain element (component). With help of a prior knowledge on spectrum distribution of X-ray beam source …and energy-dependent attenuation coefficients, the functions have explicit expressions. Newton-Raphson algorithm is employed to solve the functions. The solutions are named as the synthetical geometry projections, which are the nearly linear weighted sum of element geometry projections with respect to mean of each attenuation coefficient. In this process, the attenuation coefficients are modified to make Newton-Raphson iterative functions satisfy the convergence conditions of fixed pointed iteration(FPI) so that the solutions will approach the true synthetical geometry projections stably. The underlying images are obtained using the projections by general reconstruction algorithms such as the filtered back projection (FBP). The image gray values are adjusted according to the attenuation coefficient means to obtain proper CT numbers. RESULTS: Several examples demonstrate the proposed approach is efficient in reducing beam hardening artifacts and has satisfactory performance in the term of some general criteria. In a simulation example, the normalized root mean square difference (NRMSD) can be reduced 17.52% compared to a newest algorithm. CONCLUSIONS: Since the element geometry projections are free from the effect of beam hardening, the nearly linear weighted sum of them, the synthetical geometry projections, are almost free from the effect of beam hardening. By working out the synthetical geometry projections, the proposed approach becomes quite efficient in reducing beam hardening artifacts. Show more

Keywords: X-ray CT, metal artifact, beam hardening, Newton-Raphson algorithm, fixed pointed iteration

DOI: 10.3233/XST-16187

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 417-428, 2017

Authors: Cai, Ailong | Wang, Linyuan | Li, Lei | Yan, Bin | Zheng, Zhizhong | Zhang, Hanming | Zhang, Wenkun | Lu, Wanli | Hu, Guoen

Article Type: Research Article

Abstract: Nowadays, diversities of task-specific applications for computed tomography (CT) have already proposed multiple challenges for algorithm design of image reconstructions. Consequently, efficient algorithm design tool is necessary to be established. A fast and efficient algorithm design framework for CT image reconstruction, which is based on alternating direction method (ADM) with ordered subsets (OS), is proposed, termed as OS-ADM. The general ideas of ADM and OS have been abstractly introduced and then they are combined for solving convex optimizations in CT image reconstruction. Standard procedures are concluded for algorithm design which contain 1) model mapping, 2) sub-problem dividing and 3) solving, …4) OS level setting and 5) algorithm evaluation. Typical reconstruction problems are modeled as convex optimizations, including (non-negative) least-square, constrained L1 minimization, constrained total variation (TV) minimization and TV minimizations with different data fidelity terms. Efficient working algorithms for these problems are derived with detailed derivations by the proposed framework. In addition, both simulations and real CT projections are tested to verify the performances of two TV-based algorithms. Experimental investigations indicate that these algorithms are of the state-of-the-art performances. The algorithm instances show that the proposed OS-ADM framework is promising for practical applications. Show more

Keywords: Image reconstruction, alternating direction method, ordered subsets, optimization-based algorithm designframework, fast working algorithm design

DOI: 10.3233/XST-16172

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 429-464, 2017

Authors: Chen, Chun-You | Lee, Liang-Ming | Yu, Hsiao-Wei | Lee, Steve P. | Lee, Hsin-Lun | Lin, Yung-Wei | Wen, Yu-Ching | Chen, Yi-Ju | Chen, Chiu-Ping | Tsai, Jo-Ting

Article Type: Research Article

Abstract: BACKGROUND AND PURPOSE: As recent studies have suggested relatively low α/β for prostate cancer, the interest in hypofractionated stereotactic body radiotherapy (SBRT) for prostate cancer is rising. The aim of this study is to compare dosimetric results of Cyberknife (CK) with Tomotherapy (HT) in SBRT for localized prostate cancer. Furthermore, the radiobiologic consequences of heterogeneous dose distribution are also analyzed. MATERIAL AND METHOD: A total of 12 cases of localized prostate cancer previously treated with SBRT were collected. Treatments had been planned and delivered using CK. Then HT plans were generated for comparison afterwards. The prescribed dose …was 37.5Gy in 5 fractions. Dosimetric indices for target volumes and organs at risk (OAR) were compared. For radiobiological evaluation, generalized equivalent uniform dose (gEUD) and normal tissue complication probability (NTCP) were calculated and compared. RESULT: Both CK and HT achieved target coverage while meeting OAR constraints adequately. HT plans resulted in better dose homogeneity (Homogeneity index: 1.04±0.01 vs. 1.21±0.01; p  = 0.0022), target coverage (97.74±0.86% vs. 96.56±1.17%; p  = 0.0076) and conformity (new vonformity index: 1.16±0.05 vs. 1.21±0.04; p  = 0.0096). HT was shown to predict lower late rectal toxicity as compared to CK. Integral dose to body was also significantly lower in HT plans (46.59±6.44 Gy’L vs 57.05±11.68 Gy’L; p  = 0.0029). CONCLUSION: Based on physical dosimetry and radiobiologic considerations, HT may have advantages over CK, specifically in rectal sparing which could translate into clinical benefit of decreased late toxicities. Show more

Keywords: Stereotactic body radiation therapy (SBRT), prostate cancer, equivalent uniform dose (EUD), normal tissue complication probability (NTCP), cyberknife, tomotherapy

DOI: 10.3233/XST-16169

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 465-477, 2017

Authors: Goudarzi, M. | Saviz, Sh. | Ghoranneviss, M. | Salar Elahi, A.

Article Type: Research Article

Abstract: Antibacterial surfaces such as copper coatings are able to reduce the growth of bacteria. In this study, copper coatings was deposited on the 316 stainless steel substrates by a handmade device operating as an atmospheric plasma spraying system. The chemical composition microstructure and morphology surface of the coatings are examined by x-ray diffraction (XRD) and scanning electron microscope (SEM) and back scattering electron microscope (BSE). Micro hardness as one of the key properties of the coating is characterized based on cross-section. We also evaluate the thickness and the adhesion strength of the coating. Dissection material of coating is performed by …energy dispersive x-ray spectroscopy (EDX). Further, the antibacterial activity of our coatings is assessed by both gram negative Escherichia coli ATCC 10536 and gram positive Staphylococcus aureus PTCC 1112 bacteria. As the last step, the antibacterial performance of the coated stainless steel surface with copper are compared to uncoated one. Results confirm that the copper coatings improve the antibacterial property of substrates and owning fine antibacterial behavior compared to stainless steel. Show more

Keywords: Atmospheric plasma spray, copper coating, antibacterial surface

DOI: 10.3233/XST-16194

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 479-485, 2017

Authors: Wu, Weiwen | Yu, Hengyong | Wang, Shaoyu | Liu, Fenglin

Article Type: Research Article

Abstract: The objective of this study is to present and test a new ultra-low-cost linear scan based tomography architecture. Similar to linear tomosynthesis, the source and detector are translated in opposite directions and the data acquisition system targets on a region-of-interest (ROI) to acquire data for image reconstruction. This kind of tomographic architecture was named parallel translational computed tomography (PTCT). In previous studies, filtered backprojection (FBP)-type algorithms were developed to reconstruct images from PTCT. However, the reconstructed ROI images from truncated projections have severe truncation artefact. In order to overcome this limitation, we in this study proposed two backprojection filtering (BPF)-type …algorithms named MP-BPF and MZ-BPF to reconstruct ROI images from truncated PTCT data. A weight function is constructed to deal with data redundancy for multi-linear translations modes. Extensive numerical simulations are performed to evaluate the proposed MP-BPF and MZ-BPF algorithms for PTCT in fan-beam geometry. Qualitative and quantitative results demonstrate that the proposed BPF-type algorithms cannot only more accurately reconstruct ROI images from truncated projections but also generate high-quality images for the entire image support in some circumstances. Show more

Keywords: Image reconstruction, parallel translational computed tomography, backprojection filtration, region-of-interest, data truncation

DOI: 10.3233/XST-16208

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 487-504, 2017

Authors: Kang, W.G. | Pyo, S.H. | Alkhuraiji, T.S. | Han, B.S. | Kang, C.M.

Article Type: Research Article

Abstract: The King AbdulAziz City for Science & Technology in the Kingdom of Saudi Arabia plans to build a 10 MeV, 15 kW linear accelerator (LINAC) for electron beam and X-ray. The accelerator will be supplied by EB Tech, Republic of Korea, and the design and construction of the accelerator building will be conducted in the cooperation with EB Tech. This report presents the shielding analysis of the accelerator building using the Monte Carlo N-Particle Transport Code (MCNP). In order to improve the accuracy in estimating deep radiation penetration and to reduce computation time, various variance reduction techniques, including the weight window (WW) …method, the deterministic transport (DXTRAN) spheres were considered. Radiation levels were estimated at selected locations in the shielding facility running MCNP6 for particle histories up to 1.0×10+8 . The final results indicated that the calculated doses at all selected detector locations met the dose requirement of 50 mSv/yr, which is the United State Nuclear Regulatory Commission (U.S. NRC) requirement. Show more

Keywords: Monte Carlo transport, MCNP, electron linear accelerator, radiation shielding, occupational dose limit, variance reduction

DOI: 10.3233/XST-16196

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 505-514, 2017

Authors: Mikhailov, I.F. | Baturin, A.A. | Mikhailov, A.I. | Borisova, S.S. | Reshetnyak, M.V. | Galata, D.I.

Article Type: Research Article

Abstract: A method for urinary iodine diagnostics using a portable energy-dispersion X-ray fluorescent (EDXRF) spectrometer is proposed. The principle of the method consists in excitation of the sample atoms fluorescence by the energy spectrum intentionally formed from the spectrum of an X-ray tube using an optimized X-ray scheme. The optimization by the criterion of the minimum detection limit for L- series iodine fluorescence lines included the calculation of optimal atomic numbers for materials of a re-radiator and a filter, and their thicknesses, the collimation system parameters, and an X-ray tube voltage. Experimentally achieved detection limits were 45 and 75 μg/L by …I-L α and I-L β lines, respectively, at the theoretically extreme value 30 μg/L. This sensitivity is found to be sufficient for urinary iodine diagnostics in the range from 50 to 200 μg/L. The results obtained from different patients have shown the satisfactory convergence for the iodine concentration determination by L α and I-L β fluorescence lines. The simple sample preparation procedure and comparably small sizes of the apparatus allows rapid researches directly in clinical settings. Show more

Keywords: X-ray fluorescence spectrum, selective excitation, urinary iodine, rapid diagnostics.

DOI: 10.3233/XST-16204

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 515-521, 2017

Authors: Xu, Xianfeng | Li, Zhenzhou | Liu, Jin | Yu, Sha | Wei, Zhaolian

Article Type: Research Article

Abstract: OBJECTIVE: To investigate the microRNA expression profiling in endometriosis-associate infertility, and relationship between the microRNA expression and endometrial receptivity evaluated by ultrasound. METHODS: First, miRNA expression profiling difference of ectopic endometrium between 8 endometriosis patients and 6 endometriosis-free patients were compared. Bioinformatics analyses detected 61 differentially expressed (DE) known miRNAs and 57 DE novel miRNAs. Next, other 24 patients were selected for checking the microRNAs in differential expression by RT-PCR. Among them, case and control groups include 14 endometriosis and 10 endometriosis-free infertility patients, respectively. Last, endometrial receptivity of other 20 endometriosis patients was evaluated by ultrasound. …In this group of patients, 12 had high endometrial receptivity, in which infertility is caused by fallopian tube occlusion, and 8 had low endometrial receptivity. The study compared endometrial miRNAs expression between two groups, and also evaluated the relationship between the endometrial miRNAs expression and the endometrial receptivity. RESULTS: First, study indicated that “proteinaceous extracellular matrix,” “laminin binding” and “extracellular matrix binding” were enriched in 6 up-regulated miRNA targets, while “cell proliferation” was enriched in the 4 down-regulated miRNA targets. Second, 10 miRNAs in different expression (miR-1304- 3p, miR-544b, miR-3684, miR-494-5p, miR-4683, miR-6747-3p; miR-3935, miR-4427, miR-652-5p, miR-205-5p) were detected by RT-PCR, and the results showed statistically significant differences between 2 groups in all 10 miRNAs. Third, the expression levels of miR-1304-3p, miR-494-5p, and miR-4427 were different between the two groups with different endometrial receptivity. But for the miR-544b, there was no statistically significant difference between two groups. CONCLUSIONS: The study provided a comprehensive understanding to the current knowledge in the field of miRNAs in endometriosis and the relationship between them and the endometrial receptivity. miRNAs could be used as diagnostic biomarkers and therapeutic agents for this disease. The combination of ultrasound and miRNAs detection could be a better choice for the diagnosis of infertility in the future. Show more

Keywords: Ectopic endometrium, miRNA, endometrial receptivity, ultrasound

DOI: 10.3233/XST-17286

Citation: Journal of X-Ray Science and Technology, vol. 25, no. 3, pp. 523-532, 2017