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Article type: Research Article
Authors: Yu, Wei | Hegarty, John P. | Berg, Arthur | Kelly, Ashley A. | Wang, Yunhua | Poritz, Lisa S.; | Franke, Andre | Schreiber, Stefan | Koltun, Walter A. | Lin, Zhenwu
Affiliations: Department of Surgery, Pennsylvania State University, Hershey, PA, USA | Department of Public Health Sciences, Center for Statistical Genetics, Pennsylvania State University, Hershey, PA, USA | Department of Cellular & Molecular Physiology, Pennsylvania State University, Hershey, PA, USA | Institute for Clinical Molecular Biology, Department of General Internal Medicine, Christian-Albrechts University, Kiel, Germany
Note: [] Corresponding author: Walter A. Koltun, MD and Zhenwu Lin, PhD. Division of Colon & Rectal Surgery. Mail code H137. The Milton S. Hershey Medical Center, Penn State College of Medicine, 500 University Drive, P.O. Box 850, Hershey, PA 17033, USA. Tel.: +1 717 531 5164; Fax: +1 717 531 0646; E-mail: wkoltun@hmc.psu.edu
Abstract: PTPN2 is a risk gene for Crohn's disease (CD). We investigated whether PTPN2 genetic variants (rs2542151 and rs2542152) were associated with CD in a familial IBD registry. Both rs2542151 and rs2542152 are associated with CD, but not ulcerative colitis (UC). mRNA expression levels of PTPN2 were significantly increased in intestinal tissues (p=0.0493), and nearly significantly increased in B cells (p=0.0889) from CD patients, but not significantly altered in UC. cDNA microarray results found that PTPN2 was down-regulated by NKX2-3 knockdown in human cells. We confirmed this observation by RT-PCR analyses in NKX2-3 knockdown in B cells from IBD patients and human intestinal microvascular endothelial cells (HIMEC). In addition, we found that mRNA expression of another IBD-associated gene, NKX2-3, was increased in intestinal tissues and B cells from CD patients, but not significantly increased in UC patients. A positive correlation was observed between mRNA expression of PTPN2 and NKX2-3 in B cells and in intestinal tissues from both CD and UC patients. These results suggest that PTPN2 may have an important role in CD pathogenesis and may represent a potential diagnostic and therapeutic target for IBD.
Keywords: PTPN2, association, Crohn's disease, gene expression, NKX2-3
DOI: 10.3233/DMA-2011-0867
Journal: Disease Markers, vol. 32, no. 2, pp. 83-91, 2012
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